Updated on 2024/04/16

写真a

 
MIYAGI Atsuko
 

Research Areas

  • Life Science / Plant molecular biology and physiology

  • Life Science / Applied biochemistry

  • Life Science / Applied molecular and cellular biology

Graduating School

  • Kobe University, Faculty of Science

    2003.03, Graduated

Graduate School

  • The University of Tokyo, Graduate School, Division of Science

    Master's Course, 2005.03, Completed

  • The University of Tokyo, Graduate School, Division of Science

    Doctor's Course, 2009.03, Accomplished credits for doctoral program

External Career

  • , Part-time researcher for university or other academic organization, 2012.04 - 2013.03

  • , Part-time researcher for university or other academic organization, 2013.04 - 2018.06

  • Saitama University, Assistant Professor, 2018.07 - 2021.11

  • Yamagata University, Associate Professor, 2021.12 -

 

Papers

  • Metabolic diversity analysis and genome wide assessment of oxalate accumulation in the leaves of rice (Oryza sativa) cultivars , Plant Biotechnology, 41(1) 1-7, 2024.03

    Atsuko Miyagi, Nobuhiro Tanaka, Matthew Shenton, Kaworu Ebana, Satoshi Ohkubo, Shunsuke Adachi, Taiichiro Ookawa, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Metabolomic analysis of rice brittle culm mutants reveals each mutant- specific metabolic pattern in each organ, Metabolomics, 18 95, 2022.12

    Atsuko Miyagi, Kazuhisa Mori, Toshiki Ishikawa, Satoshi Ohkubo, Shunsuke Adachi, Masatoshi Yamaguchi, Taiichiro Ookawa, Toshihisa Kotake, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Intraspecific interaction of host plants leads to concentrated distribution of a specialist herbivore through metabolic alterations in the leaves, Functional Ecology, 36(3) 779-793, 2022.03

    Ohsaki H, Miyagi A, Kawai-Yamada M, Yamawo A

    Multiple Authorship (Only Japanese)

  • Excessive ammonium assimilation by plastidic glutamine synthetase causes ammonium toxicity in Arabidopsis thaliana., Nature Communications, 12(1) 4944, 2021.08

    Hachiya T, Inaba J, Wakazaki M, Sato M, Toyooka K, Miyagi A, Kawai-Yamada M, Sugiura D, Nakagawa T, Kiba T, Gojon A, Sakakibara H

    Multiple Authorship (Only Japanese)

  • Redox regulation of NADP-malate dehydrogenase is vital for land plants under fluctuating light environment., Proceedings of the National Academy of Sciences of the United States of America, 118(6) e2016903118, 2021.02

    Yokochi Y, Yoshida K, Hahn F, Miyagi A, Wakabayashi KI, Kawai-Yamada M, Weber APM, Hisabori T

    Multiple Authorship (Including Foreigners)

  • Metabolome analysis of rice leaves to obtain low-oxalate strain from ion beam-mutagenised population., Metabolomics, 16(9) 94, 2020.09

    Miyagi A, Saimaru T, Harigai N, Oono Y, Hase Y, Kawai-Yamada M

    Multiple Authorship (Only Japanese)

  • Phosphorus toxicity disrupts Rubisco activation and reactive oxygen species defence systems by phytic acid accumulation in leaves., Plant, Cell & Environment, 43(9) 2033-2053, 2020.09

    Takagi D, Miyagi A, Tazoe Y, Suganami M, Kawai-Yamada M, Ueda A, Suzuki Y, Noguchi K, Hirotsu N, Makino A

    Multiple Authorship (Only Japanese)

  • Dehydroascorbate Reductases and Glutathione Set a Threshold for High-Light-Induced Ascorbate Accumulation., Plant Physiology, 183(1) 112-122, 2020.05

    Terai Y, Ueno H, Ogawa T, Sawa Y, Miyagi A, Kawai-Yamada M, Ishikawa T, Maruta T

    Multiple Authorship (Only Japanese)

  • High-yielding rice Takanari has superior photosynthetic response to a commercial rice Koshihikari under fluctuating light., Journal of Experimental Botany, 70(19) 5287-5297, 2019.10

    Adachi S, Tanaka Y, Miyagi A, Kashima M, Tezuka A, Toya Y, Kobayashi S, Ohkubo S, Shimizu H, Kawai-Yamada M, Sage RF, Nagano AJ, Yamori W

    Multiple Authorship (Including Foreigners)

  • Oxalate contents in leaves of two rice cultivars grown at a free-air CO<sub>2</sub> enrichment (FACE) site, Plant Production Science, 22(3) 407-411, 2019.07

    Atsuko Miyagi, Ko Noguchi, Takeshi Tokida, Yasuhiro Usui, Hirofumi Nakamura, Hidemitsu Sakai, Toshihiro Hasegawa, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803., the Plant Journal, 98(4) 654-666, 2019.05

    Ishikawa Y, Miyagi A, Ishikawa T, Nagano M, Yamaguchi M, Hihara Y, Kaneko Y, Kawai-Yamada M

    Multiple Authorship (Only Japanese)

  • Ferredoxin/thioredoxin system plays an important role in the chloroplastic NADP status of Arabidopsis., The Plant journal : for cell and molecular biology, 95(6) 947-960, 2018.09

    Hashida SN, Miyagi A, Nishiyama M, Yoshida K, Hisabori T, Kawai-Yamada M

    Multiple Authorship (Only Japanese)

  • Evaluation of metabolic changes in oxalate-rich plant Rumex obtusifolius L. caused by ion beam irradiation., Plant physiology and biochemistry : PPB, 122 40-45, 2018.01

    Miyagi A, Kitano S, Oono Y, Hase Y, Narumi I, Yamaguchi M, Uchimiya H, Kawai-Yamada M

    Multiple Authorship (Only Japanese)

  • Synergistic effects of light quality, carbon dioxide and nutrients on metabolite compositions of head lettuce under artificial growth conditions mimicking a plant factory, Food Chemistry, 218(1) 561-568, 2017.03

    Atsuko Miyagi, Hirofumi Uchimiya, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Metabolic alterations in leaves of oxalate-rich plant Rumex obtusifolius L. irradiated by gamma rays, Metabolomics, 11(1) 134-142, 2015.02

    Sayaka Kitano, Atsuko Miyagi, Yutaka Oono, Yoshihiro Hase, Issay Narumi, Masatoshi Yamaguchi, Hirofumi Uchimiya, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Metabolome analysis of food-chain between plants and insects., Metabolomics, 9(6) 1254-1261, 2013.12

    Atsuko Miyagi, Maki Kawai-Yamada, Minori Uchimiya, Noriyuki Ojima, Koichi Suzuki, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • An antagonist treatment in combination with tracer experiments revealed isocitrate pathway dominant to oxalate biosynthesis in <i>Rumex obtusifolius</i> L., Metabolomics, 9(3) 590-598, 2013.06

    Atsuko Miyagi, Minori Uchimiya, Maki Kawai-Yamada, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Impact of aluminium stress in oxalate and other metabolites in <i>Rumex obtusifolius</i>., Weed Research, 53(1) 30-41, 2013.01

    Atsuko Miyagi, Minori Uchimiya, Maki Kawai-Yamada, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Fate of C<sup>13</sup> in metabolic pathways and effects of high CO<sub>2</sub> on the alteration of metabolites in <i>Rumex obtusifolius</i> L., Metabolomics, 7(4) 524-535, 2011.12

    Atsuko Miyagi, Kentaro Takahara, Ichiro Kasajima, Hideyuki Takahashi, Maki Kawai-Yamada, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Targeted metabolomics in an intrusive weed, <i>Rumex obtusifolius</i> L., grown under different environmental conditions reveals alterations of organ related metabolite pathway., Metabolomics, 6(4) 497-510, 2010.12

    Atsuko Miyagi, Kentaro Takahara, Hideyuki Takahashi, Maki Kawai-Yamada, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Principal component and hierarchical clustering analysis of metabolites in destructive weeds; polygonaceous plants., Metabolomics, 6(1) 146-155, 2010.03

    Atsuko Miyagi, Hideyuki Takahashi, Kentaro Takahara, Takayuki Hirabayashi, Yoshiki Nishimura, Takafumi Tezuka, Maki Kawai-Yamada, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Metabolic changes associated with dark-induced leaf senescence in Arabidopsis nadk2 mutants, Plant Signaling and Behavior, 18 e2215618, 2023.05

    Chaomurilege, Atsuko Miyagi, Toshiki Ishikawa, Masatoshi Yamaguchi, Hideki Murayama, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Loss of peroxisomal NAD kinase 3 (NADK3) affects photorespiration metabolism in Arabidopsis, Journal of Plant Physiology, 283 153950, 2023.03

    Shota Suzuki, Daimu Tanaka, Atsuko Miyagi, Kentaro Takahara, Masaru Kono, Chaomurilege, Ko Noguchi, Toshiki Ishikawa, Minoru Nagano, Masatoshi Yamaguchi, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Dynamic seasonal changes in photosynthesis systems in leaves of Asarum tamaense, an evergreen understorey herbaceous species, Annals of Botany, 131(3) 423-436, 2023.02

    Naoki Wada, Issei Kondo, Ryouichi Tanaka, Junko Kishimoto, Atsuko Miyagi, Maki Kawai-Yamada, Yusuke Mizokami, Ko Noguchi

    Multiple Authorship (Only Japanese)

  • Loss of chloroplast-localized NAD kinase causes ROS stress in Arabidopsis thaliana, Journal of Plant Research, 2023.01

    Chaomurilege, Yanhui Zu, Atsuko Miyagi, Shin-Nosuke Hashida, Toshiki Ishikawa, Masatoshi Yamaguchi, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • VNI2 effectively inhibits transcriptional activities of VND7 through a conserved sequence, Plant Biotechnology, 39(2) 147-153, 2022.06

    Aili Ailizati, Isura Sumeda Priyadarshana Nagahage, Atsuko Miyagi, Toshiki Ishikawa, Maki Kawai-Yamada, Taku Demura, Masatoshi Yamaguchi

    Multiple Authorship (Including Foreigners)

  • Arabidopsis nitrate-induced aspartate oxidase gene expression is necessary to maintain metabolic balance under nitrogen nutrient fluctuation, Communications Biology, 5 432, 2022.05

    Saito M., Konishi M., Miyagi A., Sakuraba Y., Kawai-Yamada M., Yanagisawa, S.

    Single Author

  • An Arabidopsis NAC domain transcriptional activator VND7 negatively regulates <i>VNI2</i> expression., Plant Biotechnology (Tokyo, Japan), 38(4) 415-420, 2021.12

    Ailizati A, Nagahage ISP, Miyagi A, Ishikawa T, Kawai-Yamada M, Demura T, Yamaguchi M

    Multiple Authorship (Including Foreigners)

  • Change in expression levels of NAD kinase-encoding genes in Flaveria species., Journal of Plant Physiology, 265 153495, 2021.10

    Tanaka M, Ishikawa Y, Suzuki S, Ogawa T, Taniguchi YY, Miyagi A, Ishikawa T, Yamaguchi M, Munekage YN, Kawai-Yamada M

    Multiple Authorship (Only Japanese)

  • The NAD Kinase Slr0400 Functions as a Growth Repressor in Synechocystis sp. PCC 6803., Plant & Cell Physiology, 62(4) 668-677, 2021.09

    Ishikawa Y, Cassan C, Kadeer A, Yuasa K, Sato N, Sonoike K, Kaneko Y, Miyagi A, Takahashi H, Ishikawa T, Yamaguchi M, Nishiyama Y, Hihara Y, Gibon Y, Kawai-Yamada M

    Multiple Authorship (Including Foreigners)

  • Altered metabolism of chloroplastic NAD kinase-overexpressing Arabidopsis in response to magnesium sulfate supplementation., Plant Signaling & Behavior, 16(1) 1844509, 2021.01

    Kawai-Yamada M, Miyagi A, Sato Y, Hosoi Y, Hashida SN, Ishikawa T, Yamaguchi M

    Multiple Authorship (Only Japanese)

  • Plant-Unique <i>cis</i>/<i>trans</i> Isomerism of Long-Chain Base Unsaturation is Selectively Required for Aluminum Tolerance Resulting from Glucosylceramide-Dependent Plasma Membrane Fluidity., Plants (Basel, Switzerland), 9(1) 19, 2019.12

    Sato M, Nagano M, Jin S, Miyagi A, Yamaguchi M, Kawai-Yamada M, Ishikawa T

    Multiple Authorship (Only Japanese)

  • Mitochondrial AOX Supports Redox Balance of Photosynthetic Electron Transport, Primary Metabolite Balance, and Growth in <i>Arabidopsis thaliana</i> under High Light., International journal of molecular sciences, 20(12) 3067, 2019.06

    Jiang Z, Watanabe CKA, Miyagi A, Kawai-Yamada M, Terashima I, Noguchi K

    Multiple Authorship (Only Japanese)

  • Metabolic and biochemical responses of Potamogeton anguillanus Koidz. (Potamogetonaceae) to low oxygen conditions., Journal of Plant Physiology, 232 171-179, 2019.01

    Parveen M, Miyagi A, Kawai-Yamada M, Rashid MH, Asaeda T

    Multiple Authorship (Only Japanese)

  • Effects of inactivation of the cyAbrB2 transcription factor together with glycogen synthesis on cellular metabolism and free fatty acid production in the cyanobacterium Synechocystis sp. PCC 6803., Biotechnology and Bioengineering, 115(12) 2974-2985, 2018.12

    Kodama Y, Kawahara A, Miyagi A, Ishikawa T, Kawai-Yamada M, Kaneko Y, Takimura Y, Hihara Y

    Multiple Authorship (Only Japanese)

  • Effects of elevated atmospheric CO2 on respiratory rates in mature leaves of two rice cultivars grown at a free-air CO2 enrichment site and analyses of the underlying mechanisms., Plant & Cell Physiology, 59(3) 637-649, 2018.03

    Noguchi K, Tsunoda T, Miyagi A, Kawai-Yamada M, Sugiura D, Miyazawa SI, Tokida T, Usui Y, Nakamura H, Sakai H, Hasegawa T

    Multiple Authorship (Only Japanese)

  • CE-MS–based metabolomics reveals the metabolic profile of maitake mushroom (<i>Grifola frondosa</i>) strains with different cultivation characteristics, Bioscience, Biotechnology, and Biochemistry, 81(12) 2314-2322, 2017.12

    Mayumi Sato, Atsuko Miyagi, Shozo Yoneyama, Seiki Gisusi, Yoshihiko Tokuji, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Metabolomic analysis of NAD kinase-deficient mutants of the cyanobacterium <i>Synechocystis</i> sp. PCC 6803., Journal of Plant Physiology, 205 105-112, 2016.10

    Yuuma Ishikawa, Atsuko Miyagi, Yuto Haishima, Toshiki Ishikawa, Minoru Nagano, Masatoshi Yamaguchi, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • The effects of water turbulence on variations in cell ultra-structure and metabolism of amino acids in the submersed macrophyte, <i>Elodea nuttallii</i> (Planch.) H. St. John, Plant Biology, 17(5) 997-1004, 2015.09

    Keerthi Sri Senarathna Atapaththu, Atsuko Miyagi, Kimie Atsuzawa, Yasuko Kaneko, Maki Kawai-Yamada, Takashi Asaeda

    Multiple Authorship (Only Japanese)

  • The effects of dark incubation on cellular metabolism of the wild type cyanobacterium <i>Synechocystis</i> sp. PCC 6803 and a mutant lacking the transcriptional regulator cyAbrB2., Life, 4(4) 770-787, 2014.11

    Masamitsu Hanai, Yusuke Sato, Atsuko Miyagi, Maki Kawai-Yamada, Kyoko Tanaka, Yasuko Kaneko, Yoshitaka Nishiyama, Yukako Hihara

    Multiple Authorship (Only Japanese)

  • Effects of NAD kinase 2 overexpression on primary metabolite profiles in rice leaves under elevated carbon dioxide, Plant Biology, 16(4) 819-824, 2014.07

    Yayoi Onda, Atsuko Miyagi, Kentaro Takahara, Hirofumi Uchimiya, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Culture temperature affects gene expression and metabolic pathways in the 2-methylisoborneol-producing cyanobacterium Pseudanabaena galeata, Journal of Plant Physiology, 171(3-4) 292-300, 2014.02

    Masayuki Kakimoto, Toshiki Ishikawa, Atsuko Miyagi, Kazuaki Saito, Motonobu Miyazaki, Takashi Asaeda, Masatoshi Yamaguchi, Hirofumi Uchimiya, Maki Kawai-Yamada

    Multiple Authorship (Only Japanese)

  • Deletion of the transcriptional regulator cyAbrB2 de-regulates primary carbon metabolism in <i>Synechocystis</i> sp. PCC 6803., Plant Physiology, 162(2) 1153-1163, 2013.06

    Yuki Kaniya, Ayumi Kizawa, Atsuko Miyagi, Maki Kawai-Yamada, Hirofumi Uchimiya, Yasuko Kaneko, Yoshikata Nishiyama, Yukako Hihara

    Multiple Authorship (Only Japanese)

  • Comparative metabolomics of developmental alterations caused by mineral deficiency during in vitro culture of <i>Gentiana triflora</i>., Metabolomics, 8(1) 154-163, 2012.02

    Hideyuki Takahashi, Tomohiro Imamura, Atsuko Miyagi, Hirofumi Uchimiya

    Multiple Authorship (Only Japanese)

  • Characterization of Glucosylceramides in the Polygonaceae, <i>Rumex obtusifolius</i> L. Injurious Weed., Bioscience, Biotechnology, and Biochemistry, 75(5) 877-881, 2011.05

    Masayuki Watanabe, Atsuko Miyagi, Minoru Nagano, Maki Kawai-Yamada, Hiroyuki Imai

    Multiple Authorship (Only Japanese)

  • Molecular adaptation of rbcL in the heterophyllous aquatic plant Potamogeton, PloS One, 4(2) e4633, 2009.02

    Satoko Iida, Atsuko Miyagi, Seishiro Aoki, Motomi Ito, Yasuro Kadono, Keiko Kosuge

    Multiple Authorship (Only Japanese)

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Review Papers

  • Metabolome analysis of leaves of <i>Rumex obtusifolius</i> L. irradiated with ion beams., JAEA Review 2014-050, 114, 2015.03

    Atsuko Miyagi, Sayaka Kitano, Yutaka Oono, Yoshihiro Hase, Maki Kawai-Yamada

  • Effects of gamma-ray irradiation on oxalate Metabolism in <i>Rumex obtusifolius</i> L., JAEA-Review, 2013-059 108, 2014.03

    Sayaka Kitano, Atsuko Miyagi, Yutaka Ohno, Yoshihiro Hase, Issay Narumi, Hirofumi Uchimiya, Maki Kawai-Yamada

  • Effects of gamma ray irradiation on <i>Rumex obtusifolius</i> L., JAEA-Review, 2012-046 101, 2013.03

    Sayaka Kitano, Atsuko Miyagi, Yutaka Oono, Yoshihiro Hase, Issay Narumi, Hirofumi Uchimiya, Maki Kawai-Yamada

Grant-in-Aid for Scientific Research

  • Grant-in-Aid for Scientific Research(C)，2022.04 -

  • Grant-in-Aid for Young Scientists，2018.04 - 2023.03

  • Grant-in-Aid for Young Scientists(B)，2016.04 - 2019.03